Examinando por Autor "Sánchez-Carnerero, Esther M."

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Environmental impact analysis of surface printing and 3D inkjet printing applications using an imine based covalent organic framework: A life cycle assessment study
(Elsevier, 2023) Espada, Juan J.; Rodríguez, Rosalía; Peña, Alejandro de la; Ramos, Mar; Segura, José L.; Sánchez-Carnerero, Esther M.
Covalent organic frameworks (COFs) are emerging materials with structural modularity that allows their application in many fields. The aim of this work is to determine the environmental impact of using an imine based covalent organic framework (RT-COF-1) for both surface printing (Case A) and 3D inkjet printing (Case B) by applying Life Cycle Assessment (LCA) methodology. Experimental data on RT-COF-1 synthesis as well as results obtained by simulation of their precursors production, 1,3,5-tris-(4-aminophenyl) benzene (TAPB) and 1,3,5-benzenetricarbaldehyde (BTCA), are used. LCA results show that monomer synthesis is the most important contributor to environmental impacts in both case studies. On the other hand, the contribution of solvents used in Case A is also remarkable. The comparison between both case studies indicates that the environmental impacts of Case B is lower than that of Case A (reduction within 5%–65%). Finally, LCA results of Case B are compared to other materials used for 3D-printing, such as polymerizable ionic liquids (PILs). The results show that RT–COF–1 compares favourably with PILs in five of nine impact categories, being especially relevant the reductions achieved in the abiotic depletion and acidification potential (>90%), in the primary energy consumption (⁓35%) and carbon footprint (⁓50%), suggesting the potential of RT–COF–1 as 3D-printing material from an environmental perspective. This work is a first step for further research to highlight the main environmental burdens of using COF-based materials in this application.
The impact of tunnel mutations on enzymatic catalysis depends on the tunnel-substrate complementarity and the rate-limiting step
(Elsevier, 2020-03-25) Kokkonen, Piia; Slanska, Michaela; Dockalova, Veronika; Pinto, Gaspar P.; Sánchez-Carnerero, Esther M.; Damborsky, Jiri; Klán, Petr; Prokop, Zbynek; Bednar, David
Transport of ligands between bulk solvent and the buried active sites is a critical event in the catalytic cycle of many enzymes. The rational design of transport pathways is far from trivial due to the lack of knowledge about the effect of mutations on ligand transport. The main and an auxiliary tunnel of haloalkane dehalogenase LinB have been previously engineered for improved dehalogenation of 1,2-dibromoethane (DBE). The first chemical step of DBE conversion was enhanced by L177W mutation in the main tunnel, but the rate-limiting product release was slowed down because the mutation blocked the main access tunnel and hindered protein dynamics. Three additional mutations W140A + F143L + I211L opened-up the auxiliary tunnel and enhanced the product release, making this four-point variant the most efficient catalyst with DBE. Here we study the impact of these mutations on the catalysis of bulky aromatic substrates, 4-(bromomethyl)-6,7-dimethoxycoumarin (COU) and 8-chloromethyl-4,4′-difluoro-3,5-dimethyl-4-bora-3a,4a-diaza-s-indacene (BDP). The rate-limiting step of DBE conversion is the product release, whereas the catalysis of COU and BDP is limited by the chemical step. The catalysis of COU is mainly impaired by the mutation L177W, whereas the conversion of BDP is affected primarily by the mutations W140A + F143L + I211L. The combined computational and kinetic analyses explain the differences in activities between the enzyme-substrate pairs. The effect of tunnel mutations on catalysis depends on the rate-limiting step, the complementarity of the tunnels with the substrates and is clearly specific for each enzyme-substrate pair.